Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942779.1_cds_XP_016486120.1_76985
CDS Infomation

[gene=LOC107806478] [db_xref=GeneID:107806478] [protein=WPP domain-associated protein-like] [protein_id=XP_016486120.1] [location=complement(join(47245..47313,47490..47591,47966..48095,48187..50246))] [gbkey=CDS]
Sequence

ATGGACAACCTGTTTGGTGAAATAGATTGTAGATCAAAATCAGACGGAATAGTGATGGGA
ATTCTAAGATCTGCTATGGACAAAGCACATGAAAAGGTCCAATCTGAAGCTGGATCCATT
GAGTTTCTTCACGAGAGATCAAAGTTCTATGAATTGGCAGTGATCCTTGTGGAATCAGGT
CTAAGCATTGTTCAACAAGAGACTGATATTCTTGAAAGCAACCGCGAAAAGGTCATCTCA
GACTTAACAGAAATGAGGCATTGGCTCTTGGGAAGGATTAAGGTAATGAAACTCTTAATC
ACTGAGAAAGATAGAGAATTAACAGAGAGGACTGAAAATGAGTTAAAGCTCAGACAGGTT
TTGGAATCCAAAGAAAGAGAACTTGTTTTTATTCGCGACAAATTTGAGCTTCAGAGAACA
AAGAGTGAAGGGTCTCAAGATTTGAGGTTAGTACTAAAGAATGAAGCTAAAGAATGTGAA
ACTAGTGACTCGAAGTTGGATTCAGAACTTCTAAATGAGGGAAGTTGTCAAAATGACTTG
TATGTAAGTTACCATATTCCTGAAATAAAGCCAATGACTGATCATTCATTAAGGCCTGAA
CAGAACAATGTGATTCAACAGATGAGTTCTGATATATATATTTTAAAAGAAACCTTGGAT
TTTGCATTTGGGAGAAGGGATAATGGTGAGATGGTTCCTTTAGAAAAGCAATGGAGGCGT
ACCATTGAGAAAGATACATTATCTGTCTTGATAAAAGGATTCATATATGATATCCAAAAA
AGATTTGAATCAGAGTTGAAGAAAAGGGGTGATCAAATTCCACTTGAATTTTCAAATGAG
AACTTATCAGAATTTATCTGTGAGATAACAGCGTTGCGCCATGAACTAGAGACCTTGTAT
AGTAGACATGAGGAGGGAAGGAAAACAATGAACAAGCAAGATTTCTTAGGCCAAAAGTTG
GCAAAGGTACGTCGGACGTGTAGTGAGCCTTTGCCAAAAGATGCTCGTCAACTGTCTGAT
CAAGAGGACCAAGAAGATGGTGGGAGTAATTATGTTGCTAAGCTGATTAAGAATCATGAG
TCAATTATAAAGAAGCAGTTCGAAGATCGCAATTGTAAATCCATTTTCCACAAAAAAGAC
ATGGAACTTGATATCTTGGACAGAATGATAAAAGACATCATCACAAGATTGGATGTTATA
ATAAGCTCACTGAACGTTAAGTCAATCGATAAGAAACATGTGAAAGAGAAAAACTTGGAG
TCAATAAAAGGCACTGCTACTTTATTGCTAAGTCAATTTGATATAGAAGATGGGAATTTA
GAAACATTGGTTAAGAATTTTAGAGATGGCAACATCTTACCAGAGACAATAGGGAGCCTA
TTGAAAGAGGATGTCTACATGGTACTCTTCATTGAAATGGTTAAGGCATGTAAGGAGGAA
AAAGATGATATTGATATGGAAATTCAAATAAGAGAAGATATATACAAGTTTATCATGGTT
GAGGCTGTGAAAGATGTACATACCAAATTTTCGGAATATTTGAATCCTGCTTATAAGAAG
GTGGAAATTGATGGAACTGAGGAAAGCCTGATTCAAAAGCTCGATTCTTTGTTAAAATGT
CTCGAGTCAGGGGAAGATCTAATGGCGAAAGCAAGTTCTGAGAGAGAAGAACACAATGTG
CGTCATGAACTTGAAATCTTGGAATGTGATGAGGTTGAGGAGCGCGAGACTATTGAATGG
CTGTTGAATGATGATGAGTGCACTTTCACTTCTGTGAACGAAAAACTAGAGATCGCGATG
AGACAACTGTCTACAAGCAAAGAATTGTTGTTTGATTTGGAACAAAGTCTTGGAATTTCA
CCTGATGTTTTAGCAAAAAGTACTGATGATTGCCTACACATAAACACTAGTAGTGTTGTG
TCTCAAACTGAAGAACCACAAGGGTTGTCAGTTATTAATCCATCTGATGTTTTGATCTTA
GCACAGATAGCAGATTTTCATCAAGTGATTCAAGAATTTGAGGTCAATGTAGTTCATAAT
ATAGACACAAAATCGTCGAGGTTAGAGAAACTGAAACACCAATTCCACAACTTAATTGTT
GAACCAGTTGCTTTAATAAAGAAAAGGAAATTGCTTTACAAGAAGGCTTTCTTAGCAAGA
TGTCAGAATCTAAAATTGGCTGAAACTGAGGTGGATTTGCTGGGGGATCAAGTAGAAGCA
CTTTTGCATCTGCTTGAGAAAATATACGTGATACTCGACCAAAATTCAATTGTTTTATCT
TGCCGTTTTCAGGTGTTTGACATCTTAAAACTTATCAAAGACAAGTTGGAAGATGCAGTT
GCTTGTGTATCTACTTCTTAG

Peptide Sequence

PEP ID

XP_016486120.1
PEP Infomation

PREDICTED: WPP domain-associated protein-like [Nicotiana tabacum]
Sequence

MDNLFGEIDCRSKSDGIVMGILRSAMDKAHEKVQSEAGSIEFLHERSKFYELAVILVESG
LSIVQQETDILESNREKVISDLTEMRHWLLGRIKVMKLLITEKDRELTERTENELKLRQV
LESKERELVFIRDKFELQRTKSEGSQDLRLVLKNEAKECETSDSKLDSELLNEGSCQNDL
YVSYHIPEIKPMTDHSLRPEQNNVIQQMSSDIYILKETLDFAFGRRDNGEMVPLEKQWRR
TIEKDTLSVLIKGFIYDIQKRFESELKKRGDQIPLEFSNENLSEFICEITALRHELETLY
SRHEEGRKTMNKQDFLGQKLAKVRRTCSEPLPKDARQLSDQEDQEDGGSNYVAKLIKNHE
SIIKKQFEDRNCKSIFHKKDMELDILDRMIKDIITRLDVIISSLNVKSIDKKHVKEKNLE
SIKGTATLLLSQFDIEDGNLETLVKNFRDGNILPETIGSLLKEDVYMVLFIEMVKACKEE
KDDIDMEIQIREDIYKFIMVEAVKDVHTKFSEYLNPAYKKVEIDGTEESLIQKLDSLLKC
LESGEDLMAKASSEREEHNVRHELEILECDEVEERETIEWLLNDDECTFTSVNEKLEIAM
RQLSTSKELLFDLEQSLGISPDVLAKSTDDCLHINTSSVVSQTEEPQGLSVINPSDVLIL
AQIADFHQVIQEFEVNVVHNIDTKSSRLEKLKHQFHNLIVEPVALIKKRKLLYKKAFLAR
CQNLKLAETEVDLLGDQVEALLHLLEKIYVILDQNSIVLSCRFQVFDILKLIKDKLEDAV
ACVSTS

Transcript Sequence

Gene sequence data has not been registered.